Interactive Heatmap in Python (using hvPlot and Bokeh)
Visualize interactive heatmap using hvPlot and Bokeh
Visualize interactive heatmap using hvPlot and Bokeh
Heatmap and hierarchical clustering visualization in Python
PCA using sklearn package. This article explains the basics of PCA, sample size requirement, data standardization, and interpretation of the PCA results
Volcano plot using bioinfokit package. This article explains the visualization of volcano plots for gene expression data
Multiple hypothesis testing and corrections, type I and II errors, false discovery rate, Bonferroni correction, and Benjamini/Hochberg correction
Biological data handling and processing using Python codes
Introduction, analysis, and visualization of Manhattan plot in Python
MA plot basics, analysis, and visualization
Split the nucleotide sequence into smaller sequences with defined size
FASTQ sequence example, quality formats, and quality format detection
Introduction to GFF3 and GTF files, and their interconversions using Python code
GFF3 to GTF, HMM to CSV, TAB to CSV, and CSV to TAB