Interactive Heatmap in Python (using hvPlot and Bokeh)
Visualize interactive heatmap using hvPlot and Bokeh
Make discoveries with your data
Recent posts
Heatmap in Python
Heatmap and hierarchical clustering visualization in Python
Principal component analysis (PCA) and visualization using Python (Detailed guide with example)
PCA using sklearn package. This article explains the basics of PCA, sample size requirement, data standardization, and interpretation of the PCA results
Volcano plot in Python
Volcano plot using bioinfokit package. This article explains the visualization of volcano plots for gene expression data
Multiple hypothesis testing problem in Bioinformatics
Multiple hypothesis testing and corrections, type I and II errors, false discovery rate, Bonferroni correction, and Benjamini/Hochberg correction
Bioinformatics file readers and processing (FASTA, FASTQ, and VCF)
Biological data handling and processing using Python codes
Manhattan plot in Python
Introduction, analysis, and visualization of Manhattan plot in Python
MA plot to visualize gene expression data using Python
MA plot basics, analysis, and visualization
Split the sequence into smaller subsequences
Split the nucleotide sequence into smaller sequences with defined size
FASTQ Sequence Quality Format
FASTQ sequence example, quality formats, and quality format detection
Convert GFF3 to GTF file format
Introduction to GFF3 and GTF files, and their interconversions using Python code
File format conversions
GFF3 to GTF, HMM to CSV, TAB to CSV, and CSV to TAB
